[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 83 items for (author: cai & hy)

EMDB-35931:
cryo-EM structures of Ufd4 in complex with Ubc4-Ub
Method: single particle / : Ai HS, Mao JX, Wu XW, Cai HY, Pan M, Liu L

EMDB-29686:
N2 neuraminidase of A/Tanzania/205/2010 H3N2 in complex with 4 FNI19 Fab molecules
Method: single particle / : Dang HV, Snell G

EMDB-29704:
N2 neuraminidase of A/Tanzania/205/2010 H3N2 in complex with 3 FNI9 Fab molecules
Method: single particle / : Dang HV, Snell G

EMDB-29705:
N2 neuraminidase of A/Tanzania/205/2010 H3N2 in complex with 4 FNI9 Fab molecules
Method: single particle / : Dang H, Snell G

EMDB-29706:
N2 neuraminidase of A/Hong_Kong/2671/2019 in complex with 3 FNI9 Fab molecules
Method: single particle / : Dang HV, Snell G

EMDB-29707:
N2 neuraminidase of A/Hong_Kong/2671/2019 in complex with 4 FNI9 Fab molecules
Method: single particle / : Dang HV, Snell G

EMDB-29708:
N2 neuraminidase of A/Tanzania/205/2010 H3N2 in complex with 3 FNI17 Fab molecules
Method: single particle / : Dang HV, Snell G

EMDB-29709:
N2 neuraminidase of A/Tanzania/205/2010 H3N2 with S245N S247T mutations in complex with one FNI17 Fab molecule
Method: single particle / : Dang HV, Snell G

EMDB-29710:
N2 neuraminidase of A/Hong_Kong/2671/2019 in complex with 4 FNI19 Fab molecules
Method: single particle / : Dang HV, Snell G

EMDB-29711:
Neuraminidase of B/Massachusetts/02/2012 (Yamagata) in complex with 4 FNI17 Fab molecules
Method: single particle / : Dang HV, Snell G

EMDB-29712:
N2 neuraminidase of A/Hong_Kong/2671/2019 in complex with 3 FNI19 Fab molecules
Method: single particle / : Dang HV, Snell G

PDB-8g30:
N2 neuraminidase of A/Tanzania/205/2010 H3N2 in complex with 4 FNI19 Fab molecules
Method: single particle / : Dang HV, Snell G

PDB-8g3m:
N2 neuraminidase of A/Tanzania/205/2010 H3N2 in complex with 3 FNI9 Fab molecules
Method: single particle / : Dang HV, Snell G

PDB-8g3n:
N2 neuraminidase of A/Tanzania/205/2010 H3N2 in complex with 4 FNI9 Fab molecules
Method: single particle / : Dang H, Snell G

PDB-8g3o:
N2 neuraminidase of A/Hong_Kong/2671/2019 in complex with 3 FNI9 Fab molecules
Method: single particle / : Dang HV, Snell G

PDB-8g3p:
N2 neuraminidase of A/Hong_Kong/2671/2019 in complex with 4 FNI9 Fab molecules
Method: single particle / : Dang HV, Snell G

PDB-8g3q:
N2 neuraminidase of A/Tanzania/205/2010 H3N2 in complex with 3 FNI17 Fab molecules
Method: single particle / : Dang HV, Snell G

PDB-8g3r:
N2 neuraminidase of A/Tanzania/205/2010 H3N2 with S245N S247T mutations in complex with one FNI17 Fab molecule
Method: single particle / : Dang HV, Snell G

PDB-8g3v:
N2 neuraminidase of A/Hong_Kong/2671/2019 in complex with 4 FNI19 Fab molecules
Method: single particle / : Dang HV, Snell G

PDB-8g3z:
Neuraminidase of B/Massachusetts/02/2012 (Yamagata) in complex with 4 FNI17 Fab molecules
Method: single particle / : Dang HV, Snell G

PDB-8g40:
N2 neuraminidase of A/Hong_Kong/2671/2019 in complex with 3 FNI19 Fab molecules
Method: single particle / : Dang HV, Snell G

EMDB-33241:
Cryo-EM Structure of Human Niacin Receptor HCA2-Gi protein complex
Method: single particle / : Yang Y, Kang HJ, Gao RG, Wang JJ, Han GW, DiBerto JF, Wu LJ, Tong JH, Qu L, Wu YR, Pileski R, Li XM, Zhang XC, Zhao SW, Kenakin T, Wang Q, Stevens RC, Peng W, Roth BL, Rao ZH, Liu ZJ

PDB-7xk2:
Cryo-EM Structure of Human Niacin Receptor HCA2-Gi protein complex
Method: single particle / : Yang Y, Kang HJ, Gao RG, Wang JJ, Han GW, DiBerto JF, Wu LJ, Tong JH, Qu L, Wu YR, Pileski R, Li XM, Zhang XC, Zhao SW, Kenakin T, Wang Q, Stevens RC, Peng W, Roth BL, Rao ZH, Liu ZJ

EMDB-29052:
SARS-CoV-2 Spike Hexapro - C68.59 Fab (Class 3 - disordered)
Method: single particle / : Croft JT, Lee KK

EMDB-29053:
SARS-CoV-2 Spike Hexapro - C59.68 Fab (Class 1 - No Fab bound)
Method: single particle / : Croft JT, Lee KK

EMDB-29054:
SARS-CoV-2 Spike Hexapro - C68.59 Fab (Class 2 - Fab bound)
Method: single particle / : Croft JT, Lee KK

EMDB-24822:
20S proteasome from red blood cell lysate
Method: single particle / : Verbeke EJ, Taylor DW

EMDB-24194:
SARS-CoV-2 Spike (2P) in complex with C12C11 Fab
Method: single particle / : Windsor IW, Bajic G, Tong P, Gautam AK, Wesemann DR, Harrison SC

EMDB-24192:
SARS-CoV-2 Spike (2P) in complex with C12C9 Fab (NTD local reconstruction)
Method: single particle / : Windsor IW, Jenni S, Bajic G, Tong P, Gautam AK, Wesemann DR, Harrison SC

EMDB-24193:
SARS-CoV-2 Spike (2P) in complex with G32R7 Fab (RBD and NTD local reconstruction)
Method: single particle / : Windsor IW, Jenni S, Tong P, Gautam AK, Wesemann DR, Harrison SC

EMDB-24196:
SARS-CoV-2 spike (6P) in complex with C93D9 Fab
Method: single particle / : Windsor IW, Tong P, Gautam AK, Wesemann DR, Harrison SC

EMDB-24197:
SARS-CoV-2 spike (6P) in complex with C81C10 Fab
Method: single particle / : Windsor IW, Tong P, Gautam AK, Wesemann DR, Harrison SC

EMDB-24198:
SARS-CoV-2 spike (2P) in complex with C12A2 Fab
Method: single particle / : Bajic G, Windsor IW, Tong P, Gautam A, Wesemann DR, Harrison SC

PDB-7n62:
SARS-CoV-2 Spike (2P) in complex with C12C9 Fab (NTD local reconstruction)
Method: single particle / : Windsor IW, Jenni S, Bajic G, Tong P, Gautam AK, Wesemann DR, Harrison SC

PDB-7n64:
SARS-CoV-2 Spike (2P) in complex with G32R7 Fab (RBD and NTD local reconstruction)
Method: single particle / : Windsor IW, Jenni S, Tong P, Gautam AK, Wesemann DR, Harrison SC

EMDB-30895:
The structure of FC08 Fab-hA.CE2-RBD complex
Method: single particle / : Cao L, Wang X

EMDB-30573:
A proof of concept for neutralizing antibody-guided vaccine design against SARS-CoV-2
Method: single particle / : Cao L, Wang X

EMDB-23400:
SARS-CoV-2 Spike Protein Trimer bound to DH1043 fab
Method: single particle / : Gobeil S, Acharya P

PDB-7ljr:
SARS-CoV-2 Spike Protein Trimer bound to DH1043 fab
Method: single particle / : Gobeil S, Acharya P

EMDB-23246:
CryoEM map of SARS-CoV-2 S protein in complex with Receptor Binding Domain antibody DH1041
Method: single particle / : Manne K, Acharya P

PDB-7laa:
Structure of SARS-CoV-2 S protein in complex with Receptor Binding Domain antibody DH1041
Method: single particle / : Manne K, Acharya P

EMDB-23248:
CryoEM map of SARS-CoV-2 S protein in complex with N-terminal domain antibody DH1052
Method: single particle / : Manne K, Acharya P

PDB-7lab:
Structure of SARS-CoV-2 S protein in complex with N-terminal domain antibody DH1052
Method: single particle / : Manne K, Acharya P

EMDB-11938:
Ternary complex of full-length Caspase-8 and FADD
Method: single particle / : Fox JL, Ragan TJ, Dinsdale D, Fairall L, Schwabe JWR, Morone N, Cain K, MacFarlane M

EMDB-11939:
Central region of Caspase-8:FADD ternary complex
Method: single particle / : Fox JL, Ragan TJ, Dinsdale D, Fairall L, Schwabe JWR, Morone N, Cain K, MacFarlane M

EMDB-11940:
Ternary complex of Full length Caspase-8 with FADD and FLIPs
Method: single particle / : Fox JL, Ragan TJ, Dinsdale D, Fairall L, Schwabe JWR, Morone N, Cain K, MacFarlane M

EMDB-11941:
CryoEM analysis of ternary complex of full-length Caspase-8 with FADD and FLIPs
Method: single particle / : Fox JL, Ragan TJ, Dinsdale D, Fairall L, Schwabe JWR, Morone N, Cain K, MacFarlane M

EMDB-23277:
CryoEM map of SARS-CoV-2 S protein in complex with N-terminal domain antibody DH1050.1
Method: single particle / : Manne K, Acharya P

EMDB-23279:
CryoEM map of SARS-CoV-2 S protein in complex with Receptor Binding Domain antibody DH1047
Method: single particle / : Manne K, Acharya P

PDB-7lcn:
Structure of SARS-CoV-2 S protein in complex with N-terminal domain antibody DH1050.1
Method: single particle / : Manne K, Acharya P

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more